KOREF Data Download

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FTP server => here

 

We suggest to use FTP tools to download the files,such as FileZilla on Windows, wget on Linux etc.
 
Example command)
 

 

▷ KOREF standard reference data
 
Download    -  KOREF standard reference data
 
▷ Assembly
 
Download   -  Assembly, gene set, and repeat information
 
▷ Raw Sequence Data
 
Download   -  DNA-Seq
 
Download   -  RNA-Seq
 
Download   -  Methyl-Seq
 
Download   -  Bisulfite-Seq
 
Download   -  Genome Mapping data (BioNano and OpGen)
 
Download   -  16 Participants' DNA-chip
 
▷ Variant
 
Download   -  Variants of 20 people that were called against GRCh38 but not KOREF.
 
Download   -  Variants of 20 people that were called against  KOREF but not GRCh38.
 
▷ Structure Variation
 
Download   -  Structure Variation that were called against GRCh38.
 
▷ Liftover Chain File 
 
Download   -  chain files for liftover. (KOREF - GRCh38)
 
▷ External Links
 
Link   -  KOREF1.0 Assembly at NCBI
 
Link   -  KOREF1.0 Raw Reads at NCBI SRA
 
Link   -  KPGP Raw Reads at NCBI SRA
 
Link   -  KPGP (The Personal Genome Project Korea)
 
Link   -  PAPGI (Pan-Asian Population Genomics Initiative)
 
 
The immortalized cell line of KOREF was deposited in the Korean Cell Line Bank (KCLB, #60211).
 
 
 
For KOREF related issues, please contact Jong Bhak, at jongbhak@genomics.org